Variant Detection, Annotation, & Analysis in ERGO
Quickly analysis your raw sequence files with ERGO’s integrated variant detection and annotation workflows.
ERGO’s automatic workflows provide fast and accurate variant calling using academically proven software yielding rigorous results you can rely upon.
More than just identify variants, ERGO predicts their impact. Immediately identify deleterious variants that affect organism functions.
Use ERGO’s fast and easy filtering by sequence, variant type, impact, loss of functions status, and other fields will enable you to instantly find the variants of interest.
Deepen your understanding of your data with ERGO’s visualization of variants within a genome's metabolic context. Discover which pathways are affected by SNPs, indels, and structural variants.
Features that ERGO 2.0 provides for Variant Analytics
Quality analytics of sequence reads
Variant identification such as: Single Nucleotide Polymorphisms (SNPs), Insertions & Deletions (INDELs), Structural Variants (SV) and others.
Analysis performed utilizing academically proven software such a samtools, bcftools, snpEff and others.
Variant annotation that identifies affected genes and predict their possible loss of function
Variant analysis by pathways database such as ERGO, KEGG, and Gene Ontology Terms.
Variant filtering by quality, impact, loss of function, sequence, annotation, customer filters and more.
Find common and unique variants between samples
Merging Samples
Customizable KEGG Pathway Maps