Full length vs targeted 16S/18S/ITS amplicons: Sequence length and Identification Accuracy of Microbiomes for Biomarker Discovery
Join Dr. Vinayak Kapatral and learn about full length vs targeted length amplicon sequencing for microbiome biomarker discovery.
October 1st, 2024 at 11:00 AM (CT) / 12:00 PM (ET) / 9:00 AM (PT)
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In this webinar you will learn about:
Amplicon sequencing approaches
Targeted Illumina based V1-V3 or V3-V4 short amplicons
Full length Pacbio/Oxford Nanopore based amplicons
Libraries, kits, reactions, read length, and coverage considerations
Denoising Amplicon Sequencing Samples
Taxonomy and Phylogenetic Analysis (OTUs or ASVs)
Principal Coordinates Analysis (MDS, NMDS, Bray-Curtis, UniFrac, Jaccard)
Richness Estimates (Chao1, ACE, Shannon, Simpson etc)
Linear Discriminant Analysis (LDA) with LEfSe computations
ERGO’s integrated Metagenome Analysis and Visualization Tools
and much more!